Using the latest beta Honorbuddy v2.5.6455.25. If I stop the bot (to have a pet battle, or act more human around players when the mesh glitches and I end up running into a mining node or holiday pumpkin) after resuming it will complete it's current quest objective, and then instead of returning the quest it will visit a nearby flight master, and just pause on updating flight paths. I haven't noticed this with the other versions, however I am levelling a new low level monk now, where as before it was a higher level pally that I was testing.
Using Kicks [A - Quest] EK 12-58 [Kick] & TuanHA monk routine.
I've checked the log and there is nothing going on, not updating meshes or anything.
[15:53:07.527 D] Changed POI to:Type: QuestTurnIn
[15:53:07.677 N] Moving to Type: QuestTurnIn
[15:53:17.970 D] Changed POI to:Type: Fly, R: Update
[15:53:18.124 N] Moving to Type: Fly, R: Update
[15:53:26.193 D] InteractDebug:1105896048
[15:53:26.201 D] Interact Done:1105896048
[15:53:26.924 D] Changed POI to:Type: Fly, R: Update
[15:53:50.294 D] InteractDebug:1105896048
[15:53:50.304 D] Interact Done:1105896048
[15:53:50.992 D] Changed POI to:Type: Fly, R: Update
[15:54:05.180 N] Stopping the bot!
[15:54:05.180 D] Stop called!
[15:54:05.180 Q] Bot Stopped! Reason: User pressed the Stop button!
[15:54:05.183 D] Cleared POI - Reason FlightPaths.Reset()
[15:54:05.183 D] Cleared POI
[15:54:05.185 D] Activity: Honorbuddy Stopped
After completely closing the bot and starting again it resumes it's activity as per normal. It only seems to bug if stopped during a quest and them resumed.
Hope this information is helpful.