Just tossing some thoughts out there.. i`m sorry that i might repeat what somebody all ready have suggested. Kinda multitasking here 
* The option to save X amount of balls of each kind. Ex: Keep 60 pokeballs, 100 greater, 200 master - you get the point.
* A simple way to make a route. If i know where to hunt for a spesific pokemon i could make a farming route.
* Use the berries (dont recall the name atm - the ones that increase chances of looting).
* Logging out after X-minutes \ logging back in after another set period of time.
* Camping mode - Stay in 1 spot and use lures.
* Configure movement speed, other than the preset km\hr.
* Fight in pokegym. - Side note, not a fan of this myself, as this will screw with the game for the little kids =/
Most of these things is in some free bots i`m trying, and i have no doubt this will come to the best botmakers there is! <3

* The option to save X amount of balls of each kind. Ex: Keep 60 pokeballs, 100 greater, 200 master - you get the point.
* A simple way to make a route. If i know where to hunt for a spesific pokemon i could make a farming route.
* Use the berries (dont recall the name atm - the ones that increase chances of looting).
* Logging out after X-minutes \ logging back in after another set period of time.
* Camping mode - Stay in 1 spot and use lures.
* Configure movement speed, other than the preset km\hr.
* Fight in pokegym. - Side note, not a fan of this myself, as this will screw with the game for the little kids =/
Most of these things is in some free bots i`m trying, and i have no doubt this will come to the best botmakers there is! <3